BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B09LP1|AL427119
(478 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 904 0.0
>3x_Contig1593
Length = 10902
Score = 904 bits (454), Expect = 0.0
Identities = 463/467 (99%)
Strand = Plus / Minus
Query: 1 ccgataccgaaactttcctggtctttccatcagctttggacactgtataattttgagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ccgataccgaaactttcctggtctttccatcagctttggacactgtataattttgagaaa 692
Query: 61 cagaacctgtagcctggccagaattcgtctcgtcagaagttgtgactggctcagtcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cagaacctgtagcctggccagaattcgtctcgtcagaagttgtgactggctcagtcacat 632
Query: 121 caactcctgactcagcttcagtctgggcctcggtctgggcttgaacttgttctttcaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 caactcctgactcagcttcagtctgggcctcggtctgggcttgaacttgttctttcaatc 572
Query: 181 ctcgtagcaattcattaagtttagtagtagacggcgaggtcatatwttcagtgggcatac 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 571 ctcgtagcaattcattaagtttagtagtagacggcgaggtcatattttcagtgggcatac 512
Query: 241 ttaaccttccgtctccagtggttcctttcatttgctccaagccagtggtagccatcctca 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 511 ttaaccttccgtctccagtggttcctttcatttgctccaagccagttgtagccatcctca 452
Query: 301 aaactccccttttaataacactatgagaaactattaagcaatgactccccaaggtccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaactccccttttaataacactatgagaaactattaagcaatgactccccaaggtccaaa 392
Query: 361 aagtatatgtccaacgattaaacgttcacaaaacgaaaccagtratagccagcacttgct 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 391 aagtatatgtccaacgattaaacgttcacaaaacgaaaccagttatagccagcacttgct 332
Query: 421 gatccggacgggtataaagtatatatatatatatatatatatatata 467
||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 331 gatccggacgggtataaagnatatatatatatatatatatatatata 285
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,581
Number of Sequences: 1807
Number of extensions: 11581
Number of successful extensions: 4610
Number of sequences better than 1.0e-20: 1
length of query: 478
length of database: 10,358,551
effective HSP length: 16
effective length of query: 462
effective length of database: 10,329,639
effective search space: 4772293218
effective search space used: 4772293218
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)